Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RARRES2P5-201ENST00000564013 466 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 CYMP-203ENST00000474680 1263 ntBASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SAMD11P1-201ENST00000571429 661 ntBASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF439Q8NDP4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms