Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CR392039.1-201ENST00000623217 204 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AC092299.1-201ENST00000632679 757 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AC006449.6-201ENST00000612330 2296 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 BANF1P3-201ENST00000412556 261 ntBASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 AC009560.1-201ENST00000620208 434 ntBASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC168Q8NDH2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 AC084364.1-201ENST00000551967 1556 ntBASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 AC025183.3-201ENST00000623526 1482 ntBASIC12.48□□□□□ -0.41
CCDC168Q8NDH2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms