Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.46■□□□□ 0.22
VPS52Q8N1B4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VPS52Q8N1B4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.22
VPS52Q8N1B4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VPS52Q8N1B4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
VPS52Q8N1B4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 CD8B2-202ENST00000417670 633 ntBASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ECM1P1-201ENST00000604092 1279 ntBASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AL008638.5-201ENST00000623814 1298 ntBASIC16.45■□□□□ 0.22
VPS52Q8N1B4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AC006058.4-201ENST00000624016 1670 ntBASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS52Q8N1B4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 MTX1P1-201ENST00000440904 838 ntBASIC16.44■□□□□ 0.22
VPS52Q8N1B4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 AC005695.3-201ENST00000614522 232 ntBASIC16.44■□□□□ 0.22
VPS52Q8N1B4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms