Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AL353705.2-201ENST00000428243 662 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SPDYE11-202ENST00000450699 704 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 YBX1P5-201ENST00000509441 847 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SPDYE9P-201ENST00000570642 692 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SPDYE10P-202ENST00000612005 668 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SPDYE8P-202ENST00000612377 668 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AC079781.4-201ENST00000641908 219 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AL031595.1-201ENST00000623969 4709 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 PEG13-201ENST00000631594 5667 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SPCS2P4-201ENST00000436160 681 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 ACTG1P14-201ENST00000446382 1122 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SLED1-202ENST00000512051 380 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AC243562.1-201ENST00000560672 389 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 LINC01225-203ENST00000563550 1244 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AC092902.6-201ENST00000641783 218 ntBASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM42Q8IWZ5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM42Q8IWZ5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms