Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 PRYP6-201ENST00000514804 343 ntBASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 TP73-AS1-207ENST00000624167 988 ntBASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 AC007787.1-201ENST00000588095 1583 ntBASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD2Q8IV50 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AC073648.2-201ENST00000510116 352 ntBASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AC004899.2-201ENST00000622993 3860 ntBASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD2Q8IV50 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms