Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC055876.3-201ENST00000431496 288 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 LINC02084-201ENST00000606069 1096 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC138649.4-201ENST00000612222 287 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 AC092135.3-201ENST00000624151 1846 ntBASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CRLF3Q8IUI8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CRLF3Q8IUI8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CRLF3Q8IUI8 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.21■□□□□ 0.02
CRLF3Q8IUI8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CRLF3Q8IUI8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 IGHV3-42-201ENST00000520410 361 ntBASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 MIR3197-201ENST00000582241 73 ntBASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 AC003101.2-201ENST00000612557 442 ntBASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 AC018529.1-201ENST00000613063 361 ntBASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CRLF3Q8IUI8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC152010.1-201ENST00000415779 2006 ntBASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC069120.2-201ENST00000524091 540 ntBASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms