Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AC091804.1-201ENST00000486888 567 ntBASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 REXO1L2P-201ENST00000425429 2069 ntBASIC16.82■□□□□ 0.28
TRIM50Q86XT4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 AL136379.1-201ENST00000623471 2642 ntBASIC16.82■□□□□ 0.28
TRIM50Q86XT4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AC011840.2-201ENST00000563063 1520 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AL136309.1-201ENST00000403917 691 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AC004945.1-201ENST00000416738 983 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 FNTAP2-201ENST00000430308 634 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 CALR4P-201ENST00000431943 946 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 AC007663.3-201ENST00000609632 465 ntBASIC16.81■□□□□ 0.28
TRIM50Q86XT4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM50Q86XT4 LINC00554-201ENST00000564841 3011 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM50Q86XT4 IGHJ2P-201ENST00000454480 60 ntBASIC16.8■□□□□ 0.28
TRIM50Q86XT4 AKR7A2P1-201ENST00000460134 915 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms