Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 HSPA7-201ENST00000445535 1927 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC087499.6-201ENST00000411576 835 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 FAM207CP-201ENST00000443486 507 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 CTBP2P3-201ENST00000585629 1255 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 LINC02560-201ENST00000596379 459 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC004233.3-201ENST00000607794 1269 ntBASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD1LQ86WJ1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD1LQ86WJ1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD1LQ86WJ1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 GIMAP3P-201ENST00000495150 836 ntBASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CLUHP6-201ENST00000580789 941 ntBASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 RN7SL204P-201ENST00000582831 262 ntBASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 AP005019.2-201ENST00000615104 511 ntBASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 PCDHA3-202ENST00000532566 4594 ntBASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD1LQ86WJ1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 LINC01230-201ENST00000625222 3017 ntBASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHD1LQ86WJ1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms