Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ZNF546Q86UE3 INE2-201ENST00000630399 1874 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 MEX3B-202ENST00000558133 4333 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 FAM90A12P-201ENST00000519497 2375 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 FAM90A24P-201ENST00000520792 2369 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 AL356488.2-201ENST00000602755 427 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SPTSSB-204ENST00000617024 1292 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 BEND3P3-201ENST00000611030 2440 ntBASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF546Q86UE3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC068760.1-201ENST00000493579 1953 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms