Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC026320.2-201ENST00000434379 478 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AP002803.1-201ENST00000528836 498 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC026803.1-201ENST00000569130 274 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 MIR6769A-201ENST00000617340 73 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AC027601.3-201ENST00000622907 509 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 AL139384.1-201ENST00000612143 3047 ntBASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AL359258.3-201ENST00000622910 2331 ntBASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 TLE1P1-201ENST00000422965 589 ntBASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AC242376.2-201ENST00000619355 883 ntBASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD4Q5XG99 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 CYP2T1P-202ENST00000641596 2535 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 AC006122.1-201ENST00000493323 440 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 ALG3P1-201ENST00000508806 1114 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 LINC01783-202ENST00000614408 828 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 BX284668.2-205ENST00000619677 828 ntBASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD4Q5XG99 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms