Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC093214.1-201ENST00000511688 1107 ntBASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC009407.1-201ENST00000568958 598 ntBASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 AC022144.1-201ENST00000602255 1580 ntBASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATPAF1Q5TC12 ACE3P-201ENST00000423435 1973 ntBASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 WASH3P-207ENST00000560956 1394 ntBASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC114501.2-201ENST00000439631 535 ntBASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATPAF1Q5TC12 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 AC097359.2-201ENST00000604992 2389 ntBASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.21□□□□□ -0.3
ATPAF1Q5TC12 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 AL607033.1-201ENST00000623900 1599 ntBASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.2□□□□□ -0.3
ATPAF1Q5TC12 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms