Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 MIR663B-201ENST00000408361 115 ntBASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AC100850.1-201ENST00000506768 649 ntBASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 FAM8A2P-201ENST00000528813 1142 ntBASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA8Q53HL2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CDCA8Q53HL2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDCA8Q53HL2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDCA8Q53HL2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AL354877.1-201ENST00000424412 413 ntBASIC20.7■□□□□ 0.9
CDCA8Q53HL2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 AL136301.1-201ENST00000615830 422 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms