Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AC023310.1-201ENST00000554836 735 ntBASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AC091271.1-201ENST00000611877 1162 ntBASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 AP005019.2-201ENST00000615104 511 ntBASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC144BQ3MJ40 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 AC127383.1-201ENST00000444697 1800 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 GPAA1P2-201ENST00000417923 928 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 GAPDHP40-201ENST00000505218 1006 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 AC140479.7-201ENST00000636301 2332 ntBASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC144BQ3MJ40 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 AC006001.1-201ENST00000325130 474 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 FAM197Y7-201ENST00000432892 766 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 FAM86HP-204ENST00000513466 959 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 AC078819.1-201ENST00000547454 765 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 AC012085.1-201ENST00000548270 765 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 C2orf69P2-201ENST00000562032 1123 ntBASIC17.55■□□□□ 0.4
CCDC144BQ3MJ40 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms