Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
VLDLRP98155 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
VLDLRP98155 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VLDLRP98155 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VLDLRP98155 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
VLDLRP98155 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
VLDLRP98155 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VLDLRP98155 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.21□□□□□ -0.13
VLDLRP98155 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VLDLRP98155 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.21□□□□□ -0.13
VLDLRP98155 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VLDLRP98155 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.21□□□□□ -0.13
VLDLRP98155 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VLDLRP98155 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VLDLRP98155 LILRP1-201ENST00000444199 1370 ntBASIC14.21□□□□□ -0.14
VLDLRP98155 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
VLDLRP98155 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VLDLRP98155 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.2□□□□□ -0.14
VLDLRP98155 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.2□□□□□ -0.14
VLDLRP98155 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VLDLRP98155 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VLDLRP98155 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VLDLRP98155 AL627223.1-201ENST00000416693 442 ntBASIC14.2□□□□□ -0.14
VLDLRP98155 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.2□□□□□ -0.14
VLDLRP98155 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.2□□□□□ -0.14
VLDLRP98155 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.2□□□□□ -0.14
VLDLRP98155 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.2□□□□□ -0.14
VLDLRP98155 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.2□□□□□ -0.14
VLDLRP98155 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.2□□□□□ -0.14
VLDLRP98155 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VLDLRP98155 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VLDLRP98155 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VLDLRP98155 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
VLDLRP98155 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VLDLRP98155 AC015922.1-201ENST00000421102 1152 ntBASIC14.19□□□□□ -0.14
VLDLRP98155 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 RBPMS2P1-201ENST00000437762 623 ntBASIC14.19□□□□□ -0.14
VLDLRP98155 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 RPL13P2-201ENST00000440687 659 ntBASIC14.19□□□□□ -0.14
VLDLRP98155 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.19□□□□□ -0.14
VLDLRP98155 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VLDLRP98155 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.19□□□□□ -0.14
VLDLRP98155 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.19□□□□□ -0.14
VLDLRP98155 MIR4745-201ENST00000577608 62 ntBASIC14.19□□□□□ -0.14
VLDLRP98155 MIR6069-201ENST00000620069 79 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms