Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.4□□□□□ -0.1
SKP1P63208 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SKP1P63208 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.4□□□□□ -0.1
SKP1P63208 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.4□□□□□ -0.1
SKP1P63208 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SKP1P63208 RAB43P1-201ENST00000561790 589 ntBASIC14.4□□□□□ -0.1
SKP1P63208 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.4□□□□□ -0.1
SKP1P63208 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.4□□□□□ -0.1
SKP1P63208 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 AC092384.3-202ENST00000564646 2873 ntBASIC14.4□□□□□ -0.1
SKP1P63208 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.39□□□□□ -0.11
SKP1P63208 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 LILRP1-201ENST00000444199 1370 ntBASIC14.39□□□□□ -0.11
SKP1P63208 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 HLA-K-203ENST00000430151 1046 ntBASIC14.39□□□□□ -0.11
SKP1P63208 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.39□□□□□ -0.11
SKP1P63208 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 BCRP2-202ENST00000447763 634 ntBASIC14.39□□□□□ -0.11
SKP1P63208 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.39□□□□□ -0.11
SKP1P63208 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.39□□□□□ -0.11
SKP1P63208 BCRP6-201ENST00000510112 632 ntBASIC14.39□□□□□ -0.11
SKP1P63208 BCRP7-201ENST00000511549 544 ntBASIC14.39□□□□□ -0.11
SKP1P63208 KRT17P8-201ENST00000540749 863 ntBASIC14.39□□□□□ -0.11
SKP1P63208 AC079316.1-201ENST00000548397 411 ntBASIC14.39□□□□□ -0.11
SKP1P63208 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SKP1P63208 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.39□□□□□ -0.11
SKP1P63208 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 RPSAP52-203ENST00000622976 1023 ntBASIC14.39□□□□□ -0.11
SKP1P63208 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SKP1P63208 ZBED1P1-201ENST00000502364 1930 ntBASIC14.39□□□□□ -0.11
SKP1P63208 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.39□□□□□ -0.11
SKP1P63208 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SKP1P63208 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SKP1P63208 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 AC104640.1-201ENST00000562617 2109 ntBASIC14.38□□□□□ -0.11
SKP1P63208 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 AC055811.4-201ENST00000624039 1754 ntBASIC14.38□□□□□ -0.11
SKP1P63208 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 TPM3P8-201ENST00000330554 643 ntBASIC14.38□□□□□ -0.11
SKP1P63208 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms