Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH8P55286 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH8P55286 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 AC006001.1-201ENST00000325130 474 ntBASIC16.11■□□□□ 0.17
CDH8P55286 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH8P55286 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.11■□□□□ 0.17
CDH8P55286 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.11■□□□□ 0.17
CDH8P55286 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH8P55286 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH8P55286 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH8P55286 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH8P55286 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CDH8P55286 INE2-201ENST00000630399 1874 ntBASIC16.11■□□□□ 0.17
CDH8P55286 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 AC018529.2-202ENST00000611482 3087 ntBASIC16.11■□□□□ 0.17
CDH8P55286 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDH8P55286 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDH8P55286 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH8P55286 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDH8P55286 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 CICP24-201ENST00000605464 2705 ntBASIC16.1■□□□□ 0.17
CDH8P55286 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 MIR1202-201ENST00000408529 83 ntBASIC16.1■□□□□ 0.17
CDH8P55286 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH8P55286 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH8P55286 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH8P55286 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.1■□□□□ 0.17
CDH8P55286 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH8P55286 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH8P55286 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH8P55286 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH8P55286 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH8P55286 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH8P55286 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH8P55286 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH8P55286 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH8P55286 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms