Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 API5-211ENST00000534695 560 ntTSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PMS1P54277 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.63■□□□□ 0.25
PMS1P54277 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.63■□□□□ 0.25
PMS1P54277 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 AC063926.3-201ENST00000624734 5658 ntBASIC16.63■□□□□ 0.25
PMS1P54277 HSPA7-201ENST00000445535 1927 ntBASIC16.62■□□□□ 0.25
PMS1P54277 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PMS1P54277 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.62■□□□□ 0.25
PMS1P54277 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.62■□□□□ 0.25
PMS1P54277 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.62■□□□□ 0.25
PMS1P54277 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 ELK1P1-201ENST00000485699 580 ntBASIC16.62■□□□□ 0.25
PMS1P54277 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.62■□□□□ 0.25
PMS1P54277 AC104596.2-201ENST00000512793 793 ntBASIC16.62■□□□□ 0.25
PMS1P54277 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.62■□□□□ 0.25
PMS1P54277 CTBP2P3-201ENST00000585629 1255 ntBASIC16.62■□□□□ 0.25
PMS1P54277 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 AJ011932.1-201ENST00000621707 465 ntBASIC16.62■□□□□ 0.25
PMS1P54277 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PMS1P54277 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.62■□□□□ 0.25
PMS1P54277 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PMS1P54277 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.62■□□□□ 0.25
PMS1P54277 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.62■□□□□ 0.25
PMS1P54277 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PMS1P54277 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PMS1P54277 AC007326.2-201ENST00000624224 7579 ntBASIC16.61■□□□□ 0.25
PMS1P54277 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 KLF2P2-201ENST00000416807 1039 ntBASIC16.61■□□□□ 0.25
PMS1P54277 NUS1P3-201ENST00000423502 862 ntBASIC16.61■□□□□ 0.25
PMS1P54277 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.61■□□□□ 0.25
PMS1P54277 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.61■□□□□ 0.25
PMS1P54277 WASH4P-201ENST00000564273 1246 ntBASIC16.61■□□□□ 0.25
PMS1P54277 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.61■□□□□ 0.25
PMS1P54277 RN7SL204P-201ENST00000582831 262 ntBASIC16.61■□□□□ 0.25
PMS1P54277 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.61■□□□□ 0.25
PMS1P54277 AC004466.1-201ENST00000599515 1080 ntBASIC16.61■□□□□ 0.25
PMS1P54277 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.61■□□□□ 0.25
PMS1P54277 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.61■□□□□ 0.25
PMS1P54277 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms