Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR4745-201ENST00000577608 62 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF144AP50876 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF144AP50876 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF144AP50876 AJ011932.1-201ENST00000621707 465 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF144AP50876 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF144AP50876 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
RNF144AP50876 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
RNF144AP50876 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.15
RNF144AP50876 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
RNF144AP50876 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
RNF144AP50876 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 GHSR-202ENST00000427970 912 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF144AP50876 AC123567.1-201ENST00000548294 1261 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 AC008494.3-201ENST00000606615 944 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 OR13I1P-201ENST00000609811 1264 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 AL662799.1-202ENST00000614205 422 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 AC007431.3-201ENST00000623221 587 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF144AP50876 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF144AP50876 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF144AP50876 CICP14-201ENST00000629111 2732 ntBASIC14.14□□□□□ -0.15
RNF144AP50876 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 SLC7A15P-201ENST00000424028 1363 ntBASIC14.13□□□□□ -0.15
RNF144AP50876 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms