Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.52□□□□□ -0.25
SRP9P49458 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.52□□□□□ -0.25
SRP9P49458 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.52□□□□□ -0.25
SRP9P49458 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.52□□□□□ -0.25
SRP9P49458 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.52□□□□□ -0.25
SRP9P49458 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.52□□□□□ -0.25
SRP9P49458 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SRP9P49458 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.52□□□□□ -0.25
SRP9P49458 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SRP9P49458 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SRP9P49458 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.51□□□□□ -0.25
SRP9P49458 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.51□□□□□ -0.25
SRP9P49458 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 AP001267.2-201ENST00000532619 2086 ntBASIC13.51□□□□□ -0.25
SRP9P49458 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SRP9P49458 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SRP9P49458 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.51□□□□□ -0.25
SRP9P49458 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.51□□□□□ -0.25
SRP9P49458 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.51□□□□□ -0.25
SRP9P49458 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.51□□□□□ -0.25
SRP9P49458 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.51□□□□□ -0.25
SRP9P49458 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.51□□□□□ -0.25
SRP9P49458 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.51□□□□□ -0.25
SRP9P49458 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SRP9P49458 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.51□□□□□ -0.25
SRP9P49458 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SRP9P49458 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SRP9P49458 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms