Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 AC018442.1-201ENST00000421439 2061 ntBASIC17.74■□□□□ 0.43
NEDD4P46934 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.74■□□□□ 0.43
NEDD4P46934 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NEDD4P46934 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 CD8B2-202ENST00000417670 633 ntBASIC17.73■□□□□ 0.43
NEDD4P46934 CSF2RBP1-201ENST00000447905 391 ntBASIC17.73■□□□□ 0.43
NEDD4P46934 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 AP005482.1-201ENST00000563722 1273 ntBASIC17.73■□□□□ 0.43
NEDD4P46934 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.73■□□□□ 0.43
NEDD4P46934 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.73■□□□□ 0.43
NEDD4P46934 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 LINC00552-201ENST00000625151 2579 ntBASIC17.73■□□□□ 0.43
NEDD4P46934 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NEDD4P46934 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEDD4P46934 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.73■□□□□ 0.43
NEDD4P46934 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NEDD4P46934 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.72■□□□□ 0.43
NEDD4P46934 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 FTLP10-202ENST00000505798 471 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 C2orf69P2-201ENST00000562032 1123 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 AC008687.7-202ENST00000637404 953 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NEDD4P46934 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
NEDD4P46934 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 FKBP4P6-201ENST00000457486 1332 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NEDD4P46934 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.72■□□□□ 0.43
NEDD4P46934 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.72■□□□□ 0.43
NEDD4P46934 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms