Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHKAP35790 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16■□□□□ 0.15
CHKAP35790 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHKAP35790 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 AC084364.1-201ENST00000551967 1556 ntBASIC16■□□□□ 0.15
CHKAP35790 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 AC134312.5-201ENST00000568031 1313 ntBASIC15.99■□□□□ 0.15
CHKAP35790 AL138799.1-201ENST00000448213 1675 ntBASIC15.99■□□□□ 0.15
CHKAP35790 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 AC067930.6-201ENST00000623257 4947 ntBASIC15.99■□□□□ 0.15
CHKAP35790 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHKAP35790 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CHKAP35790 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.99■□□□□ 0.15
CHKAP35790 AC012441.1-201ENST00000446669 685 ntBASIC15.99■□□□□ 0.15
CHKAP35790 AC022210.1-201ENST00000449856 793 ntBASIC15.99■□□□□ 0.15
CHKAP35790 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.99■□□□□ 0.15
CHKAP35790 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 AP001889.1-201ENST00000525414 633 ntBASIC15.99■□□□□ 0.15
CHKAP35790 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.99■□□□□ 0.15
CHKAP35790 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.99■□□□□ 0.15
CHKAP35790 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.99■□□□□ 0.15
CHKAP35790 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.99■□□□□ 0.15
CHKAP35790 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.99■□□□□ 0.15
CHKAP35790 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.99■□□□□ 0.15
CHKAP35790 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.99■□□□□ 0.15
CHKAP35790 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKAP35790 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.98■□□□□ 0.15
CHKAP35790 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
CHKAP35790 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CHKAP35790 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 MIR658-201ENST00000385210 100 ntBASIC15.98■□□□□ 0.15
CHKAP35790 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHKAP35790 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKAP35790 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKAP35790 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHKAP35790 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKAP35790 AP001582.1-201ENST00000525856 295 ntBASIC15.98■□□□□ 0.15
CHKAP35790 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms