Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TM4SF1P30408 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TM4SF1P30408 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TM4SF1P30408 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 CR383656.3-201ENST00000551315 183 ntBASIC18.39■□□□□ 0.53
TM4SF1P30408 RN7SL470P-201ENST00000583069 259 ntBASIC18.39■□□□□ 0.53
TM4SF1P30408 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.39■□□□□ 0.53
TM4SF1P30408 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.39■□□□□ 0.53
TM4SF1P30408 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 AC087481.3-201ENST00000602886 1894 ntBASIC18.39■□□□□ 0.53
TM4SF1P30408 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TM4SF1P30408 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF1P30408 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF1P30408 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 MARK2P16-201ENST00000605714 1723 ntBASIC18.38■□□□□ 0.53
TM4SF1P30408 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.38■□□□□ 0.53
TM4SF1P30408 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 AC004837.1-201ENST00000446267 564 ntBASIC18.38■□□□□ 0.53
TM4SF1P30408 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TM4SF1P30408 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.38■□□□□ 0.53
TM4SF1P30408 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF1P30408 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF1P30408 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TM4SF1P30408 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF1P30408 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM4SF1P30408 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF1P30408 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.37■□□□□ 0.53
TM4SF1P30408 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 AL139008.1-201ENST00000437894 228 ntBASIC18.37■□□□□ 0.53
TM4SF1P30408 LINC00634-202ENST00000505157 222 ntBASIC18.37■□□□□ 0.53
TM4SF1P30408 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.37■□□□□ 0.53
TM4SF1P30408 AC006158.1-201ENST00000610661 249 ntBASIC18.37■□□□□ 0.53
TM4SF1P30408 AC138466.4-201ENST00000623965 852 ntBASIC18.37■□□□□ 0.53
TM4SF1P30408 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TM4SF1P30408 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms