Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC138749.3-201ENST00000567691 622 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
PTPN6P29350 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.38□□□□□ -0.11
PTPN6P29350 SPDYE22P-201ENST00000582158 798 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 AC116165.1-201ENST00000611806 668 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
PTPN6P29350 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 AL158212.4-201ENST00000624062 1286 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 AC093525.8-201ENST00000624099 1342 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 AL391825.1-201ENST00000457671 1364 ntBASIC14.37□□□□□ -0.11
PTPN6P29350 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 MEP1AP4-201ENST00000423244 1087 ntBASIC14.37□□□□□ -0.11
PTPN6P29350 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.37□□□□□ -0.11
PTPN6P29350 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.37□□□□□ -0.11
PTPN6P29350 AC055876.2-201ENST00000531834 546 ntBASIC14.37□□□□□ -0.11
PTPN6P29350 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.37□□□□□ -0.11
PTPN6P29350 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.37□□□□□ -0.11
PTPN6P29350 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.37□□□□□ -0.11
PTPN6P29350 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.37□□□□□ -0.11
PTPN6P29350 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.37□□□□□ -0.11
PTPN6P29350 AL662799.1-202ENST00000614205 422 ntBASIC14.37□□□□□ -0.11
PTPN6P29350 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTPN6P29350 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
PTPN6P29350 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.37□□□□□ -0.11
PTPN6P29350 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PTPN6P29350 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 AC023090.2-201ENST00000625182 2110 ntBASIC14.36□□□□□ -0.11
PTPN6P29350 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.36□□□□□ -0.11
PTPN6P29350 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 SLC7A15P-201ENST00000424028 1363 ntBASIC14.36□□□□□ -0.11
PTPN6P29350 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.36□□□□□ -0.11
PTPN6P29350 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PTPN6P29350 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN6P29350 AC152010.1-201ENST00000415779 2006 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms