Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.23■□□□□ 0.67
RXRBP28702 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 LTB4R2-202ENST00000528054 3092 ntBASIC19.23■□□□□ 0.67
RXRBP28702 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.23■□□□□ 0.67
RXRBP28702 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 OR10N1P-201ENST00000392758 869 ntBASIC19.23■□□□□ 0.67
RXRBP28702 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.23■□□□□ 0.67
RXRBP28702 ISL1-203ENST00000511384 981 ntTSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC19.23■□□□□ 0.67
RXRBP28702 TYMSP2-201ENST00000589501 424 ntBASIC19.23■□□□□ 0.67
RXRBP28702 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC19.23■□□□□ 0.67
RXRBP28702 AC139713.2-207ENST00000641556 1292 ntBASIC19.23■□□□□ 0.67
RXRBP28702 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
RXRBP28702 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RXRBP28702 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.23■□□□□ 0.67
RXRBP28702 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC19.23■□□□□ 0.67
RXRBP28702 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RXRBP28702 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.22■□□□□ 0.67
RXRBP28702 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.22■□□□□ 0.67
RXRBP28702 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RXRBP28702 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC19.22■□□□□ 0.67
RXRBP28702 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.22■□□□□ 0.67
RXRBP28702 AL773545.2-201ENST00000442149 472 ntBASIC19.22■□□□□ 0.67
RXRBP28702 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC19.22■□□□□ 0.67
RXRBP28702 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC19.22■□□□□ 0.67
RXRBP28702 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.22■□□□□ 0.67
RXRBP28702 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.22■□□□□ 0.67
RXRBP28702 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.22■□□□□ 0.67
RXRBP28702 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.22■□□□□ 0.67
RXRBP28702 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 AP006248.1-201ENST00000610471 67 ntBASIC19.22■□□□□ 0.67
RXRBP28702 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.22■□□□□ 0.67
RXRBP28702 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC19.22■□□□□ 0.67
RXRBP28702 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 AC005865.2-202ENST00000635814 725 ntBASIC19.22■□□□□ 0.67
RXRBP28702 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 AC138932.1-201ENST00000534164 6830 ntBASIC19.22■□□□□ 0.67
RXRBP28702 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.22■□□□□ 0.67
RXRBP28702 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.22■□□□□ 0.67
RXRBP28702 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RXRBP28702 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RXRBP28702 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 AC127383.1-201ENST00000444697 1800 ntBASIC19.21■□□□□ 0.67
RXRBP28702 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RXRBP28702 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC19.21■□□□□ 0.67
RXRBP28702 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 MIR611-201ENST00000384869 67 ntBASIC19.21■□□□□ 0.67
RXRBP28702 RPL5P21-201ENST00000404620 815 ntBASIC19.21■□□□□ 0.67
RXRBP28702 RN7SL672P-201ENST00000474091 317 ntBASIC19.21■□□□□ 0.67
RXRBP28702 AC147876.1-201ENST00000504408 322 ntBASIC19.21■□□□□ 0.67
RXRBP28702 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.21■□□□□ 0.67
RXRBP28702 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.21■□□□□ 0.67
RXRBP28702 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC19.21■□□□□ 0.67
RXRBP28702 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.21■□□□□ 0.67
RXRBP28702 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC19.21■□□□□ 0.67
RXRBP28702 AC015912.3-201ENST00000619432 348 ntBASIC19.21■□□□□ 0.67
RXRBP28702 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RXRBP28702 REXO1L2P-201ENST00000425429 2069 ntBASIC19.21■□□□□ 0.67
RXRBP28702 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms