Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHMLP26374 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHMLP26374 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHMLP26374 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMLP26374 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMLP26374 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHMLP26374 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMLP26374 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMLP26374 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMLP26374 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMLP26374 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHMLP26374 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMLP26374 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 AC012441.1-201ENST00000446669 685 ntBASIC18.17■□□□□ 0.5
CHMLP26374 FO681548.1-201ENST00000455617 1132 ntBASIC18.17■□□□□ 0.5
CHMLP26374 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.17■□□□□ 0.5
CHMLP26374 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.17■□□□□ 0.5
CHMLP26374 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.17■□□□□ 0.5
CHMLP26374 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 MIR5189-201ENST00000577370 114 ntBASIC18.17■□□□□ 0.5
CHMLP26374 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHMLP26374 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMLP26374 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMLP26374 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMLP26374 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMLP26374 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMLP26374 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHMLP26374 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CHMLP26374 TPT1P11-201ENST00000458482 498 ntBASIC18.16■□□□□ 0.5
CHMLP26374 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMLP26374 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMLP26374 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHMLP26374 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMLP26374 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CHMLP26374 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 AC015656.1-201ENST00000624209 3578 ntBASIC18.15■□□□□ 0.5
CHMLP26374 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 SALL4P5-201ENST00000419001 1760 ntBASIC18.15■□□□□ 0.5
CHMLP26374 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 BAATP1-201ENST00000412284 1225 ntBASIC18.15■□□□□ 0.5
CHMLP26374 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMLP26374 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMLP26374 AC010319.3-201ENST00000597028 470 ntBASIC18.15■□□□□ 0.5
CHMLP26374 AC145423.3-201ENST00000615987 467 ntBASIC18.15■□□□□ 0.5
CHMLP26374 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMLP26374 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 AL138725.1-201ENST00000407347 1314 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms