Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL1P22362 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.99□□□□□ -0.33
CCL1P22362 KLF2P2-201ENST00000416807 1039 ntBASIC12.99□□□□□ -0.33
CCL1P22362 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL1P22362 GNAQP1-201ENST00000444815 1067 ntBASIC12.99□□□□□ -0.33
CCL1P22362 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.99□□□□□ -0.33
CCL1P22362 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL1P22362 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.99□□□□□ -0.33
CCL1P22362 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 AC005498.2-205ENST00000593218 784 ntBASIC12.99□□□□□ -0.33
CCL1P22362 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 MIR8072-201ENST00000614241 80 ntBASIC12.99□□□□□ -0.33
CCL1P22362 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCL1P22362 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.99□□□□□ -0.33
CCL1P22362 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCL1P22362 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCL1P22362 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL1P22362 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 BEND3P1-201ENST00000421591 1944 ntBASIC12.98□□□□□ -0.33
CCL1P22362 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 AC041040.2-201ENST00000622926 2899 ntBASIC12.98□□□□□ -0.33
CCL1P22362 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CCL1P22362 SOCS2P1-201ENST00000417727 557 ntBASIC12.98□□□□□ -0.33
CCL1P22362 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 EIF3FP3-201ENST00000434851 1086 ntBASIC12.98□□□□□ -0.33
CCL1P22362 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL1P22362 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 AP001582.1-201ENST00000525856 295 ntBASIC12.98□□□□□ -0.33
CCL1P22362 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms