Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A2P16615 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A2P16615 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A2P16615 AL023775.1-201ENST00000454907 1746 ntBASIC16.79■□□□□ 0.28
ATP2A2P16615 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A2P16615 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A2P16615 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 AP005117.1-202ENST00000581724 1908 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 MIR648-201ENST00000385046 94 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 AC016700.1-201ENST00000429424 312 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A2P16615 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP2A2P16615 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP2A2P16615 RN7SL48P-201ENST00000579283 293 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 MIR5572-201ENST00000583188 137 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A2P16615 AC007663.3-201ENST00000609632 465 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 AP001505.2-201ENST00000616815 443 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP2A2P16615 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 TCAF2P1-201ENST00000291129 2421 ntBASIC16.78■□□□□ 0.28
ATP2A2P16615 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A2P16615 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A2P16615 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A2P16615 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A2P16615 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A2P16615 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A2P16615 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A2P16615 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A2P16615 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A2P16615 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ATP2A2P16615 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 AC104457.1-201ENST00000401024 814 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 ACTBP8-201ENST00000403258 1108 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 AC079178.1-201ENST00000420915 656 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2A2P16615 MAGEA5-201ENST00000446757 942 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 LINC02447-202ENST00000501888 2146 ntBASIC16.77■□□□□ 0.28
ATP2A2P16615 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.77■□□□□ 0.28
ATP2A2P16615 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A2P16615 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
ATP2A2P16615 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2A2P16615 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A2P16615 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
ATP2A2P16615 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
ATP2A2P16615 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms