Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
COL6A2P12110 AC006538.3-201ENST00000612495 578 ntBASIC14.98□□□□□ -0.01
COL6A2P12110 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 AC006504.5-208ENST00000588784 2401 ntBASIC14.98□□□□□ -0.01
COL6A2P12110 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
COL6A2P12110 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 AC117489.1-201ENST00000625169 3217 ntBASIC14.97□□□□□ -0.01
COL6A2P12110 AC092135.3-201ENST00000624151 1846 ntBASIC14.97□□□□□ -0.01
COL6A2P12110 CLK3P2-201ENST00000427566 1453 ntBASIC14.97□□□□□ -0.01
COL6A2P12110 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 AC241585.1-201ENST00000433527 519 ntBASIC14.97□□□□□ -0.01
COL6A2P12110 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
COL6A2P12110 GPALPP1-207ENST00000611650 899 ntBASIC14.97□□□□□ -0.01
COL6A2P12110 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
COL6A2P12110 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.97□□□□□ -0.01
COL6A2P12110 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL6A2P12110 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL6A2P12110 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 AC010327.5-201ENST00000586923 3061 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.96□□□□□ -0.01
COL6A2P12110 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms