Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 PTENP1-202ENST00000532280 3996 ntBASIC16.46■□□□□ 0.23
CCDC172P0C7W6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC172P0C7W6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CCDC172P0C7W6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 AC093028.1-201ENST00000622998 982 ntBASIC16.45■□□□□ 0.22
CCDC172P0C7W6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC172P0C7W6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 LILRP1-201ENST00000444199 1370 ntBASIC16.44■□□□□ 0.22
CCDC172P0C7W6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 AC009477.1-201ENST00000452936 217 ntBASIC16.44■□□□□ 0.22
CCDC172P0C7W6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 LINC00552-201ENST00000625151 2579 ntBASIC16.44■□□□□ 0.22
CCDC172P0C7W6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC172P0C7W6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms