Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 LINC01101-201ENST00000622953 1884 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 AC020658.6-201ENST00000623564 1870 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.34■□□□□ 0.69
COL5A2P05997 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 OR8T1P-201ENST00000421347 918 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC19.34■□□□□ 0.69
COL5A2P05997 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 HERC2P11-201ENST00000562845 725 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 AC100756.2-201ENST00000569537 736 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 RN7SL665P-201ENST00000578793 300 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 RN7SL357P-201ENST00000581065 298 ntBASIC19.34■□□□□ 0.69
COL5A2P05997 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
COL5A2P05997 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.33■□□□□ 0.69
COL5A2P05997 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 AC126365.1-201ENST00000578585 1514 ntBASIC19.33■□□□□ 0.69
COL5A2P05997 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.33■□□□□ 0.69
COL5A2P05997 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.33■□□□□ 0.69
COL5A2P05997 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL5A2P05997 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.33■□□□□ 0.69
COL5A2P05997 AC092135.3-201ENST00000624151 1846 ntBASIC19.33■□□□□ 0.69
COL5A2P05997 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL5A2P05997 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL5A2P05997 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.33■□□□□ 0.68
COL5A2P05997 COX20P1-201ENST00000366529 357 ntBASIC19.33■□□□□ 0.68
COL5A2P05997 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.33■□□□□ 0.68
COL5A2P05997 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.33■□□□□ 0.68
COL5A2P05997 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.33■□□□□ 0.68
COL5A2P05997 AC012158.2-201ENST00000536546 354 ntBASIC19.33■□□□□ 0.68
COL5A2P05997 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.33■□□□□ 0.68
COL5A2P05997 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.33■□□□□ 0.68
COL5A2P05997 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 PRAL-201ENST00000624952 3286 ntBASIC19.33■□□□□ 0.68
COL5A2P05997 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL5A2P05997 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.32■□□□□ 0.68
COL5A2P05997 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.32■□□□□ 0.68
COL5A2P05997 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.32■□□□□ 0.68
COL5A2P05997 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.32■□□□□ 0.68
COL5A2P05997 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.32■□□□□ 0.68
COL5A2P05997 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.32■□□□□ 0.68
COL5A2P05997 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.32■□□□□ 0.68
COL5A2P05997 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
COL5A2P05997 SIGLEC22P-201ENST00000599104 714 ntBASIC19.32■□□□□ 0.68
COL5A2P05997 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.32■□□□□ 0.68
COL5A2P05997 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.32■□□□□ 0.68
COL5A2P05997 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL5A2P05997 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms