Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLR3DP05423 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 KRT8P44-201ENST00000441609 1350 ntBASIC18.07■□□□□ 0.48
POLR3DP05423 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 AL360270.3-201ENST00000609118 1348 ntBASIC18.07■□□□□ 0.48
POLR3DP05423 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.07■□□□□ 0.48
POLR3DP05423 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 AC245100.3-201ENST00000441281 285 ntBASIC18.07■□□□□ 0.48
POLR3DP05423 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.07■□□□□ 0.48
POLR3DP05423 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
POLR3DP05423 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.07■□□□□ 0.48
POLR3DP05423 MIR4741-201ENST00000579822 90 ntBASIC18.07■□□□□ 0.48
POLR3DP05423 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.07■□□□□ 0.48
POLR3DP05423 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.07■□□□□ 0.48
POLR3DP05423 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR3DP05423 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
POLR3DP05423 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3DP05423 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3DP05423 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 AL359258.3-201ENST00000622910 2331 ntBASIC18.06■□□□□ 0.48
POLR3DP05423 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
POLR3DP05423 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3DP05423 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3DP05423 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3DP05423 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3DP05423 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
POLR3DP05423 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR3DP05423 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 AC023024.2-201ENST00000623561 1993 ntBASIC18.06■□□□□ 0.48
POLR3DP05423 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3DP05423 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3DP05423 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms