Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.75□□□□□ -0.37
CD74P04233 SPDYE9P-201ENST00000570642 692 ntBASIC12.75□□□□□ -0.37
CD74P04233 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.75□□□□□ -0.37
CD74P04233 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.75□□□□□ -0.37
CD74P04233 AC026120.1-201ENST00000611536 926 ntBASIC12.75□□□□□ -0.37
CD74P04233 SPDYE10P-202ENST00000612005 668 ntBASIC12.75□□□□□ -0.37
CD74P04233 SPDYE8P-202ENST00000612377 668 ntBASIC12.75□□□□□ -0.37
CD74P04233 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 AC015909.5-201ENST00000624336 2266 ntBASIC12.75□□□□□ -0.37
CD74P04233 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CD74P04233 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CD74P04233 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
CD74P04233 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 KRT18P43-201ENST00000469825 1281 ntBASIC12.74□□□□□ -0.37
CD74P04233 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 KRT8P48-201ENST00000515599 1220 ntBASIC12.74□□□□□ -0.37
CD74P04233 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.74□□□□□ -0.37
CD74P04233 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CD74P04233 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.74□□□□□ -0.37
CD74P04233 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.74□□□□□ -0.37
CD74P04233 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.74□□□□□ -0.37
CD74P04233 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 AC092902.6-201ENST00000641783 218 ntBASIC12.74□□□□□ -0.37
CD74P04233 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 AC073548.1-201ENST00000624088 1882 ntBASIC12.74□□□□□ -0.37
CD74P04233 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.74□□□□□ -0.37
CD74P04233 AC126335.2-201ENST00000623362 4637 ntBASIC12.74□□□□□ -0.37
CD74P04233 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CD74P04233 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD74P04233 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD74P04233 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 AL121723.1-201ENST00000445194 1519 ntBASIC12.73□□□□□ -0.37
CD74P04233 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms