Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.57□□□□□ -0.24
APOA1P02647 AC011467.4-201ENST00000594891 528 ntBASIC13.57□□□□□ -0.24
APOA1P02647 AC008608.2-201ENST00000606089 416 ntBASIC13.57□□□□□ -0.24
APOA1P02647 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 NPAP1P7-201ENST00000613027 823 ntBASIC13.57□□□□□ -0.24
APOA1P02647 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.57□□□□□ -0.24
APOA1P02647 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.57□□□□□ -0.24
APOA1P02647 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
APOA1P02647 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.57□□□□□ -0.24
APOA1P02647 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
APOA1P02647 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOA1P02647 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
APOA1P02647 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 PCED1CP-201ENST00000419887 785 ntBASIC13.56□□□□□ -0.24
APOA1P02647 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.56□□□□□ -0.24
APOA1P02647 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
APOA1P02647 CXCL1P1-201ENST00000502804 216 ntBASIC13.56□□□□□ -0.24
APOA1P02647 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 AL450472.2-201ENST00000603663 1156 ntBASIC13.56□□□□□ -0.24
APOA1P02647 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.56□□□□□ -0.24
APOA1P02647 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
APOA1P02647 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
APOA1P02647 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOA1P02647 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 AC073548.1-201ENST00000624088 1882 ntBASIC13.55□□□□□ -0.24
APOA1P02647 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 326.9 ms