Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 AL512343.1-201ENST00000605837 169 ntBASIC14.18□□□□□ -0.14
CTNSO60931 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.18□□□□□ -0.14
CTNSO60931 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTNSO60931 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CTNSO60931 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTNSO60931 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 AC079776.1-201ENST00000401540 1152 ntBASIC14.17□□□□□ -0.14
CTNSO60931 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 CD8B2-202ENST00000417670 633 ntBASIC14.17□□□□□ -0.14
CTNSO60931 CROCCP4-201ENST00000457096 498 ntBASIC14.17□□□□□ -0.14
CTNSO60931 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 AP000812.2-201ENST00000538934 718 ntBASIC14.17□□□□□ -0.14
CTNSO60931 AC244669.2-201ENST00000612320 853 ntBASIC14.17□□□□□ -0.14
CTNSO60931 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.17□□□□□ -0.14
CTNSO60931 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.17□□□□□ -0.14
CTNSO60931 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.17□□□□□ -0.14
CTNSO60931 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTNSO60931 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms