Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AC003102.2-201ENST00000589195 1469 ntBASIC13.57□□□□□ -0.24
ZIC3O60481 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZIC3O60481 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.57□□□□□ -0.24
ZIC3O60481 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.57□□□□□ -0.24
ZIC3O60481 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.57□□□□□ -0.24
ZIC3O60481 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.57□□□□□ -0.24
ZIC3O60481 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AC010328.2-201ENST00000597698 1111 ntBASIC13.57□□□□□ -0.24
ZIC3O60481 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.57□□□□□ -0.24
ZIC3O60481 AL033527.4-201ENST00000641026 673 ntBASIC13.57□□□□□ -0.24
ZIC3O60481 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ZIC3O60481 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.57□□□□□ -0.24
ZIC3O60481 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AC020910.5-201ENST00000623668 1865 ntBASIC13.57□□□□□ -0.24
ZIC3O60481 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ZIC3O60481 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 AC011840.2-201ENST00000563063 1520 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 AC004945.1-201ENST00000416738 983 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 TLE1P1-201ENST00000422965 589 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.56□□□□□ -0.24
ZIC3O60481 AC007969.1-201ENST00000433675 447 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 AC007274.1-201ENST00000439805 662 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.56□□□□□ -0.24
ZIC3O60481 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ZIC3O60481 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ZIC3O60481 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 AC006058.4-201ENST00000624016 1670 ntBASIC13.56□□□□□ -0.24
ZIC3O60481 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZIC3O60481 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.56□□□□□ -0.24
ZIC3O60481 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms