Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 ZBED1P1-201ENST00000502364 1930 ntBASIC13.55□□□□□ -0.24
CXCL13O43927 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CXCL13O43927 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CXCL13O43927 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCL13O43927 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 FO681548.1-201ENST00000455617 1132 ntBASIC13.55□□□□□ -0.24
CXCL13O43927 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCL13O43927 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 AGAP7P-201ENST00000582299 2062 ntBASIC13.55□□□□□ -0.24
CXCL13O43927 AGAP14-201ENST00000624701 2060 ntBASIC13.55□□□□□ -0.24
CXCL13O43927 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 AC097376.2-205ENST00000610159 5334 ntBASIC13.54□□□□□ -0.24
CXCL13O43927 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CXCL13O43927 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCL13O43927 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 AC244107.1-201ENST00000442033 332 ntBASIC13.54□□□□□ -0.24
CXCL13O43927 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCL13O43927 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCL13O43927 AC004466.1-201ENST00000599515 1080 ntBASIC13.54□□□□□ -0.24
CXCL13O43927 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 TCAF2P1-201ENST00000291129 2421 ntBASIC13.54□□□□□ -0.24
CXCL13O43927 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCL13O43927 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCL13O43927 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCL13O43927 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms