Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.22□□□□□ -0.29
XRCC2O43543 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.22□□□□□ -0.29
XRCC2O43543 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 BRI3BPP1-201ENST00000594224 787 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
XRCC2O43543 AJ011932.1-201ENST00000621707 465 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.22□□□□□ -0.29
XRCC2O43543 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
XRCC2O43543 INTS4P2-202ENST00000614726 2019 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 LINC00552-201ENST00000625151 2579 ntBASIC13.22□□□□□ -0.29
XRCC2O43543 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
XRCC2O43543 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 AC134915.1-201ENST00000426461 574 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 AL442647.2-201ENST00000429864 857 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 DFFBP1-201ENST00000433250 979 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.21□□□□□ -0.29
XRCC2O43543 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.21□□□□□ -0.29
XRCC2O43543 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.21□□□□□ -0.29
XRCC2O43543 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 AC093726.1-201ENST00000608064 963 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 AC004790.1-201ENST00000612686 536 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 AL662799.1-202ENST00000614205 422 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 AC007431.3-201ENST00000623221 587 ntBASIC13.21□□□□□ -0.29
XRCC2O43543 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.21□□□□□ -0.29
XRCC2O43543 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
XRCC2O43543 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
XRCC2O43543 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
XRCC2O43543 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
XRCC2O43543 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
XRCC2O43543 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
XRCC2O43543 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms