Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 AL359881.3-201ENST00000602640 1721 ntBASIC12.62□□□□□ -0.39
AP4M1O00189 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.62□□□□□ -0.39
AP4M1O00189 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
AP4M1O00189 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.62□□□□□ -0.39
AP4M1O00189 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.62□□□□□ -0.39
AP4M1O00189 BCRP1-201ENST00000444246 691 ntBASIC12.62□□□□□ -0.39
AP4M1O00189 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.62□□□□□ -0.39
AP4M1O00189 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CES1P1-201ENST00000421606 1704 ntBASIC12.62□□□□□ -0.39
AP4M1O00189 AC069224.1-201ENST00000566372 1715 ntBASIC12.62□□□□□ -0.39
AP4M1O00189 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
AP4M1O00189 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.62□□□□□ -0.39
AP4M1O00189 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP4M1O00189 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.62□□□□□ -0.39
AP4M1O00189 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
AP4M1O00189 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.61□□□□□ -0.39
AP4M1O00189 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AP4M1O00189 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AP4M1O00189 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.61□□□□□ -0.39
AP4M1O00189 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.61□□□□□ -0.39
AP4M1O00189 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.61□□□□□ -0.39
AP4M1O00189 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 AC022144.1-201ENST00000602255 1580 ntBASIC12.61□□□□□ -0.39
AP4M1O00189 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP4M1O00189 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.61□□□□□ -0.39
AP4M1O00189 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.61□□□□□ -0.39
AP4M1O00189 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.61□□□□□ -0.39
AP4M1O00189 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AP4M1O00189 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms