Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AP001582.1-201ENST00000525856 295 ntBASIC15.19■□□□□ 0.02
CFAP99D6REC4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 AC093525.8-201ENST00000624099 1342 ntBASIC15.18■□□□□ 0.02
CFAP99D6REC4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 RN7SL752P-201ENST00000463779 287 ntBASIC15.18■□□□□ 0.02
CFAP99D6REC4 RN7SL692P-201ENST00000464677 288 ntBASIC15.18■□□□□ 0.02
CFAP99D6REC4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.18■□□□□ 0.02
CFAP99D6REC4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP99D6REC4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CFAP99D6REC4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms