Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 IL9RP2-201ENST00000423948 1312 ntBASIC12.99□□□□□ -0.33
TMEM235A6NFC5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AC023274.1-201ENST00000418278 595 ntBASIC12.99□□□□□ -0.33
TMEM235A6NFC5 KRT18P64-201ENST00000434946 1219 ntBASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 TPT1P11-201ENST00000458482 498 ntBASIC12.99□□□□□ -0.33
TMEM235A6NFC5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM235A6NFC5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 KRT8P12-202ENST00000472924 1397 ntBASIC12.98□□□□□ -0.33
TMEM235A6NFC5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 AC027601.4-201ENST00000611259 610 ntBASIC12.98□□□□□ -0.33
TMEM235A6NFC5 AC018529.1-201ENST00000613063 361 ntBASIC12.98□□□□□ -0.33
TMEM235A6NFC5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 CICP17-201ENST00000418553 2377 ntBASIC12.98□□□□□ -0.33
TMEM235A6NFC5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM235A6NFC5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AL122018.1-201ENST00000446607 2310 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms