Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 AC093813.1-201ENST00000605066 256 ntBASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 AC018529.2-202ENST00000611482 3087 ntBASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPDC1A2A3K4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AL138799.1-201ENST00000448213 1675 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AC012441.1-201ENST00000446669 685 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 BNIP3P42-201ENST00000454982 569 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 BNIP3P29-201ENST00000598302 571 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AC011447.5-201ENST00000616168 564 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 MTHFR-210ENST00000641407 2387 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 AL158070.2-201ENST00000623713 1621 ntBASIC17.8■□□□□ 0.44
PTPDC1A2A3K4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 HLA-K-203ENST00000430151 1046 ntBASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 AC106760.1-201ENST00000508690 800 ntBASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms