Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 BX842568.4-201ENST00000421222 227 ntBASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC051619.7-201ENST00000568314 623 ntBASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRBV6-7A0A0A0MS04 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC015909.5-201ENST00000624336 2266 ntBASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL138828.2-201ENST00000615812 383 ntBASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 SPDYE12P-201ENST00000618416 771 ntBASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL109936.8-201ENST00000641772 604 ntBASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 CR383656.2-201ENST00000548656 2254 ntBASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms