Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 KRT8P22-201ENST00000562317 1415 ntBASIC17.98■□□□□ 0.47
CYP46A1Q9Y6A2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CYP46A1Q9Y6A2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC015656.1-201ENST00000624209 3578 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AP001582.1-201ENST00000525856 295 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC092552.1-201ENST00000547243 906 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC123567.1-201ENST00000548294 1261 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC124283.3-201ENST00000570869 594 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC027796.2-201ENST00000575326 344 ntBASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CYP46A1Q9Y6A2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AL391825.1-201ENST00000457671 1364 ntBASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AC098850.1-201ENST00000419919 790 ntBASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AL359711.2-201ENST00000563105 872 ntBASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AJ011932.1-201ENST00000621707 465 ntBASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AC097359.2-201ENST00000604992 2389 ntBASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.96■□□□□ 0.47
CYP46A1Q9Y6A2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CYP46A1Q9Y6A2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CYP46A1Q9Y6A2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CYP46A1Q9Y6A2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 AC007541.1-201ENST00000570282 1469 ntBASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP46A1Q9Y6A2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms