Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AL645937.2-201ENST00000396808 931 ntBASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC010740.1-201ENST00000417035 684 ntBASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC055876.2-201ENST00000531834 546 ntBASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC099568.2-201ENST00000609194 695 ntBASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AL359183.1-201ENST00000623796 2132 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC104596.2-201ENST00000512793 793 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC093813.1-201ENST00000605066 256 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC107373.2-201ENST00000607735 490 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AC004790.1-201ENST00000612686 536 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms