Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 AC106881.1-201ENST00000605849 3329 ntBASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR1DQ9Y2S0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 BTBD7P1-201ENST00000447253 1453 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC012508.2-201ENST00000567613 1472 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC099063.4-201ENST00000641099 1602 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC114501.2-201ENST00000439631 535 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC036164.1-201ENST00000570544 333 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AC013726.1-201ENST00000563747 2285 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 CICP24-201ENST00000605464 2705 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR1DQ9Y2S0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms