Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AC105339.3-201ENST00000560043 636 ntBASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AL589182.2-201ENST00000619332 1049 ntBASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AC008735.5-201ENST00000623544 497 ntBASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AC116407.3-201ENST00000623905 1129 ntBASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UBQLN2Q9UHD9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.9□□□□□ -0.35
UBQLN2Q9UHD9 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
UBQLN2Q9UHD9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC018529.2-202ENST00000611482 3087 ntBASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 ELK2BP-201ENST00000415014 1224 ntBASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 RNA5SP419-201ENST00000515908 135 ntBASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC006504.4-201ENST00000592118 1568 ntBASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 AC068760.1-201ENST00000493579 1953 ntBASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBQLN2Q9UHD9 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 IL9RP2-201ENST00000423948 1312 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms