Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 MIR6869-201ENST00000619434 62 ntBASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 AC138466.3-201ENST00000619983 221 ntBASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 MIR326-201ENST00000362220 95 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 MESTP3-201ENST00000503460 968 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 RN7SL219P-201ENST00000582872 296 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 OR10B1P-201ENST00000601666 907 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AC073413.1-201ENST00000603927 732 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20BQ9P0W2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 BRWD1P1-201ENST00000401091 371 ntBASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 LILRP1-201ENST00000444199 1370 ntBASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 HOMER2P2-201ENST00000451621 847 ntBASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 COX5BP1-201ENST00000507622 393 ntBASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMG20BQ9P0W2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 AC013726.1-201ENST00000563747 2285 ntBASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 ACE3P-201ENST00000423435 1973 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms