Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 AJ011931.1-201ENST00000618749 2492 ntBASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KCMF1Q9P0J7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 BAATP1-201ENST00000412284 1225 ntBASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 TTTY23B-201ENST00000442790 549 ntBASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AC007389.4-201ENST00000454674 793 ntBASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCMF1Q9P0J7 PCDHA3-202ENST00000532566 4594 ntBASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 ACTBP8-201ENST00000403258 1108 ntBASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms