Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MIR4745-201ENST00000577608 62 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 SPDYE22P-201ENST00000582158 798 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 RN7SL204P-201ENST00000582831 262 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 CHCHD2P3-201ENST00000603038 451 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 AC133539.2-201ENST00000604757 467 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 TMEM261P1-201ENST00000604899 340 ntBASIC12.57□□□□□ -0.4
CALYQ9NYX4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.57□□□□□ -0.4
CALYQ9NYX4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CALYQ9NYX4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 FAM45BP-202ENST00000592932 1624 ntBASIC12.56□□□□□ -0.4
CALYQ9NYX4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 AL355385.1-201ENST00000606123 409 ntBASIC12.56□□□□□ -0.4
CALYQ9NYX4 AL137783.1-201ENST00000623494 1896 ntBASIC12.56□□□□□ -0.4
CALYQ9NYX4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.56□□□□□ -0.4
CALYQ9NYX4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.56□□□□□ -0.4
CALYQ9NYX4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CALYQ9NYX4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CALYQ9NYX4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CALYQ9NYX4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms