Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 FTH1P14-201ENST00000482930 551 ntBASIC16.12■□□□□ 0.17
CISHQ9NSE2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 RN7SL48P-201ENST00000579283 293 ntBASIC16.12■□□□□ 0.17
CISHQ9NSE2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 AC063926.2-201ENST00000623766 1308 ntBASIC16.12■□□□□ 0.17
CISHQ9NSE2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.11■□□□□ 0.17
CISHQ9NSE2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AC245100.3-201ENST00000441281 285 ntBASIC16.11■□□□□ 0.17
CISHQ9NSE2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ENPP7P14-201ENST00000621765 1040 ntBASIC16.11■□□□□ 0.17
CISHQ9NSE2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 AC106881.1-201ENST00000605849 3329 ntBASIC16.11■□□□□ 0.17
CISHQ9NSE2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 FLJ16779-201ENST00000612722 7638 ntBASIC16.11■□□□□ 0.17
CISHQ9NSE2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CISHQ9NSE2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CISHQ9NSE2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 POM121L8P-201ENST00000417732 1281 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 KRT43P-201ENST00000434019 910 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 C2orf27AP3-201ENST00000434123 579 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CISHQ9NSE2 POM121L9P-203ENST00000441984 1285 ntBASIC16.1■□□□□ 0.17
CISHQ9NSE2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.1■□□□□ 0.17
CISHQ9NSE2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms